Cheap Flights from San Juan to Houston, TX from $95

Return flight: Houston – San Juan

On Cheapflightsplus.com you will find 6 direct and 257 connecting flights from San Juan to Houston. You can compare airfare deals from 7 airlines and multiple travel sites from $95, book and save on cheap plane tickets and last minute offers. Also check out SJU-HOU flight schedule to find best flight time, convenient departure and arrival airports.

Flight Information

Below we will explain in detail what the flights cost on the destination from San Juan to Houston depends on and how to choose the most interesting flight option for you.

Distance between San Juan and Houston is 3211 miles. Time difference between the cities is 2h. Airplanes depart 01:05 to 23:59 from 2 San Juan airports and arrive 01:05 to 23:59 to 15 Houston airports. Average flight time is 4h 50m.

  • The fastest flight 4h 45m
  • Average flight time 4h 50m
  • The earliest flight 01:05
  • The latest flight 23:59
  • Distance 1996 ml

The cheapest months to travel to Houston are november (from 95 $), november (from 95 $), december (from 102 $).

The most expensive months are january (from 306 $), february (from 209 $), september (from 118 $).

What is the lowest airfare San Juan to Houston?

The cheapest plane ticket found by our users is $95. This airfare is for economy class on one-way F91823 flight by Frontier Airlines for November 5, 2025 which leaves Luis Munoz Marin Intl in San Juan at 03:40 am and arrives at Houston George Bush at 15:43.

Economy class
$95
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Business class
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First class
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Flight Schedule San Juan to Houston (Texas)

02:05 — 05:59
4h 54m flight time
Find flight
from$233
San Juan — Houston
UA2495 United Airlines
02:15 — 19:40
18h 25m flight time
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from$111
02:15 — 06:53 San Juan — Detroit
NK1546 Spirit Airlines
10h 38m stop
17:31 — 19:40 Detroit — Houston
NK1541 Spirit Airlines
03:40 — 15:43
13h 3m flight time
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from$95
03:59 — 06:09 San Juan — Orlando
F91823 Frontier Airlines
7h 8m stop
13:58 — 15:51 Orlando — Houston
F93469 Frontier Airlines
03:40 — 10:47
8h 7m flight time
Find flight
from$118
03:59 — 06:09 San Juan — Orlando
F91823 Frontier Airlines
2h 18m stop
08:45 — 10:37 Orlando — Houston
F91417 Frontier Airlines
07:00 — 10:51
4h 51m flight time
Find flight
from$230
San Juan — Houston
UA1644 United Airlines
10:04 — 15:43
6h 39m flight time
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from$102
15:03 — 17:27 San Juan — Orlando
F92249 Frontier Airlines
41m stop
14:11 — 16:01 Orlando — Houston
F93469 Frontier Airlines
10:51 — 20:20
10h 29m flight time
Find flight
from$111
10:51 — 13:54 San Juan — Orlando
NK3160 Spirit Airlines
4h 53m stop
18:47 — 20:20 Orlando — Houston
NK1376 Spirit Airlines
11:34 — 15:19
4h 45m flight time
Find flight
from$142
San Juan — Houston
NK1625 Spirit Airlines
11:43 — 15:28
4h 45m flight time
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from$220
San Juan — Houston
NK2528 Spirit Airlines
13:07 — 00:15
12h 8m flight time
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from$111
13:07 — 17:17 San Juan — Philadelphia
NK1544 Spirit Airlines
4h 14m stop
21:31 — 00:15 Philadelphia — Houston
NK1615 Spirit Airlines
13:30 — 22:11
9h 41m flight time
Find flight
from$120
13:30 — 17:40 San Juan — Newark
UA1173 United Airlines
1h 35m stop
19:15 — 22:11 Newark — Houston
UA1128 United Airlines
14:55 — 18:46
4h 51m flight time
Find flight
from$231
San Juan — Houston
UA668 United Airlines
15:21 — 22:03
7h 42m flight time
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from$118
15:08 — 19:18 San Juan — Atlanta
F92871 Frontier Airlines
1h 4m stop
21:30 — 22:56 Atlanta — Houston
F94075 Frontier Airlines
15:50 — 23:41
8h 51m flight time
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from$111
15:50 — 20:05 San Juan — Atlanta
NK1390 Spirit Airlines
2h 18m stop
22:23 — 23:41 Atlanta — Houston
NK1465 Spirit Airlines
19:19 — 23:07
4h 48m flight time
Find flight
from$182
San Juan — Houston
NK1152 Spirit Airlines
Full flight schedule will help you in detecting at what time planes fly from San Juan to Houston. You can also specify the concrete flights and airlines on the route and how long the flight actually is. Use the calendar for today, tomorrow or other specific date as some flights are available only on certain days of the week.
*Departure and arrival times - local. Updated on October 30, 2025.

Popular Airlines on the Route

The flight San Juan — Houston is served by 7 regular airlines and 2 low-cost airlines. Most of the flights on this route are operated by Cape Air - 8 departures per week at the price of from $ 392 . And the most expensive tickets are offered by United Airlines airline - from $ 607.

Direct flights

There are 6 nonstop flights on the route. The fastest direct flight is NK1625 by Spirit Airlines takes 4h 45m and the cheapest is F91823 by Frontier Airlines for $142.

  • UA - United Airlines
    from $230
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  • NK - Spirit Airlines
    from $142
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Connecting Flights

There are 257 flights with layovers on the route. The fastest connecting flight is NK1038 by Spirit Airlines takes 6h 17m and the cheapest is F91823 by Frontier Airlines for $95.

  • 9K - Cape Air
    from $392
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  • F9 - Frontier Airlines
    from $95
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  • AV - Avianca
    from $366
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  • DM - Aero-Charter
    from $344
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  • 3M - Gulfstream International Airlines
    from $450
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  • UA - United Airlines
    from $120
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  • NK - Spirit Airlines
    from $111
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See more connecting flights

Airports

You can fly from San Juan to Houston from 2 airports (Isla Grande, Luis Munoz Marin Intl).

San Juan airports

  • Isla Grande-SIG
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  • Luis Munoz Marin Intl-SJU
    from $95
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Houston airports

  • Ellington Field-EFD
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  • West Houston-IWS
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  • Hobby-HOU
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  • Park Ten Heliport-JPT
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  • Andrau Airpark-AAP
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  • George Bush-IAH
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  • Greenway Plaza H/P-JGP
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  • David Wayne Hooks-DWH
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  • Transco Twr Galleria-JGQ
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  • Westchase Hilton H/P-JWH
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  • Spaceland-SPX
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  • Woodlawns-JWL
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  • Marriot Astrodome Heliport-JMA
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  • Central Bus. District-JDX
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  • Houston Municipal-SGR
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How to book a plane ticket yourself?

How to book an air ticket yourself?
  • Fill in the search parameters — cities of departure and destination, departure and return dates and click «Find flights»
  • Select the best flight that you like. Please, check the airports of departure and arrival. Select the best fare, but pay attention to the following flight details - airports of departure and arrival, flight duration and layovers. Please use filters and sort to find the best flight.
  • Click «Buy» when you are ready — our system will redirect you to the site that sells the selected flight ticket.
  • Fill in all passenger and payment information — passport and contact information, please double check all passengers’ names and make a payment for your itinerary.
  • That's it — you will receive an email with your e-ticket usually within 10 minutes after your flight is confirmed. Please, print the e-ticket and have it with you at the airport. You would need to have only a passport and/or a required form of ID to travel. Please, check your Visa requirements if you travel outside of the United States or Canada.

    To find a plane ticket, please select dates.

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