Cheap Flights from Houston, TX to San Juan from $98
Return flight: San Juan – Houston
On Cheapflightsplus.com you will find 6 direct and 338 connecting flights from Houston to San Juan. You can compare airfare deals from 7 airlines and multiple travel sites from $98, book and save on cheap plane tickets and last minute offers. Also check out HOU-SJU flight schedule to find best flight time, convenient departure and arrival airports.
Find One-Way and Round-Trip Houston to San Juan Flight Deals
To find the cheapest one way airline ticket select the date with the lowest price on the calendar below and click «Find Flights».
To search for round-trip flight deals click on the link «Check prices for return flights» and select the date of the return flight.
Cheapest flights in November: $98 (one-way), $168 (round-trip).
Direct flights
Check prices for return flight
Best Flights from Houston to San Juan Today
Take a look at the list of non stop flights and flights with layovers from Houston to San Juan with the lowest price of $98. The fastest direct flight takes 4h 22m and the fastest connecting – 6h 11m.
| Price | Departure | Arrival | Flight Duration | Airline | Flight |
|---|---|---|---|---|---|
| from $117 | 16:24 Houston George Bush | 21:50 San Juan Luis Munoz Marin Intl | 4h 26m | Spirit Airlines | NK1626 |
| from $119 | 15:03 Houston George Bush | 20:38 San Juan Luis Munoz Marin Intl | 4h 35m | United Airlines | UA701 |
| from $146 | 16:55 Houston George Bush | 22:17 San Juan Luis Munoz Marin Intl | 4h 22m | Spirit Airlines | NK2529 |
| from $188 | 23:57 Houston George Bush | 05:30+1 день San Juan Luis Munoz Marin Intl | 4h 33m | United Airlines | UA1497 |
| from $276 | 12:48 Houston George Bush | 18:24 San Juan Luis Munoz Marin Intl | 4h 36m | Spirit Airlines | NK1151 |
| from $98 | 20:51 Houston George Bush | 11:01+1 день San Juan Luis Munoz Marin Intl | 13h 10m layover 7h 26m - Orlando | Frontier Airlines | F94978 F91824 |
| from $113 | 19:36 Houston George Bush | 09:43+1 день San Juan Luis Munoz Marin Intl | 13h 7m layover 6h 2m - Philadelphia | Spirit Airlines | NK2231 NK2303 |
| from $113 | 20:45 Houston George Bush | 12:02+1 день San Juan Luis Munoz Marin Intl | 14h 17m layover 6h 56m - Detroit | Spirit Airlines | NK1542 NK1543 |
| from $113 | 18:58 Houston George Bush | 12:02+1 день San Juan Luis Munoz Marin Intl | 16h 4m layover 8h 40m - Detroit | Spirit Airlines | NK524 NK1543 |
| from $114 | 15:11 Houston George Bush | 01:35+1 день San Juan Luis Munoz Marin Intl | 9h 24m layover 4h 0m - Orlando | Spirit Airlines | NK1702 NK1514 |
| from $114 | 13:15 Houston George Bush | 01:04+1 день San Juan Luis Munoz Marin Intl | 10h 49m layover 3h 30m - Philadelphia | Spirit Airlines | NK3157 NK2165 |
| from $114 | 21:13 Houston George Bush | 12:20+1 день San Juan Luis Munoz Marin Intl | 14h 7m layover 8h 51m - Orlando | Spirit Airlines | NK1173 NK1989 |
| from $114 | 18:25 Houston George Bush | 10:06+1 день San Juan Luis Munoz Marin Intl | 14h 41m layover 9h 42m - Miami | Spirit Airlines | NK1631 NK1396 |
| from $120 | 16:43 Houston George Bush | 23:54+1 день San Juan Luis Munoz Marin Intl | 6h 11m layover 0h 53m - Orlando | Frontier Airlines | F91418 F93506 |
| from $148 | 20:44 Houston George Bush | 09:43+2 дня San Juan Luis Munoz Marin Intl | 35h 59m layover 19h 35m - Miami 7h 17m - Philadelphia | Spirit Airlines | NK2067 NK2229 NK2303 |
| from $174 | 21:06 Houston George Bush | 19:19+1 день San Juan Luis Munoz Marin Intl | 21h 13m layover 5h 31m - Tampa 10h 10m - Miami | Spirit Airlines | NK2024 NK2577 NK2221 |
Show all tickets
*Departure and arrival times - local. Prices indicated for one-way flights. Information updated on August 29, 2025
Flight Schedule Houston (Texas) to San Juan
Full flight schedule will help you in detecting at what time planes fly from Houston to San Juan. You can also specify the concrete flights and airlines on the route and how long the flight actually is. Use the calendar for today, tomorrow or other specific date as some flights are available only on certain days of the week.
| Departure | Arrival | Flight Details | Flight Duration | Price |
|---|---|---|---|---|
|
10:07 — 15:42
|
10:07 — 15:42
UA1192
United Airlines
Houston — San Juan
|
4h 35m |
Find flight
from$188 |
|
|
12:48 — 18:24
|
12:48 — 18:24
NK1151
Spirit Airlines
Houston — San Juan
|
4h 36m |
Find flight
from$276 |
|
|
15:03 — 20:38
|
15:03 — 20:38
UA701
United Airlines
Houston — San Juan
|
4h 35m |
Find flight
from$119 |
|
|
16:24 — 21:50
|
16:24 — 21:50
NK1626
Spirit Airlines
Houston — San Juan
|
4h 26m |
Find flight
from$117 |
|
|
16:55 — 22:17
|
16:55 — 22:17
NK2529
Spirit Airlines
Houston — San Juan
|
4h 22m |
Find flight
from$146 |
|
|
23:57 — 05:30
+1 day
|
23:57 — 05:30
UA1497
United Airlines
Houston — San Juan
|
4h 33m |
Find flight
from$188 |
|
|
05:00 — 16:17
|
06:50 — 10:17
NK2397
Spirit Airlines
Houston — Orlando
5h 5m stop
22:09 — 00:54
NK1989
Spirit Airlines
Orlando — San Juan
|
10h 17m including layover |
Find flight
from$143 |
|
|
05:30 — 22:09
|
05:30 — 09:46
NK1612
Spirit Airlines
Houston — Philadelphia
8h 36m stop
18:22 — 22:09
NK1545
Spirit Airlines
Philadelphia — San Juan
|
15h 39m including layover |
Find flight
from$114 |
|
|
06:00 — 14:15
|
07:00 — 10:18
F91404
Frontier Airlines
Houston — Atlanta
1h 22m stop
11:36 — 15:15
F92082
Frontier Airlines
Atlanta — San Juan
|
7h 15m including layover |
Find flight
from$120 |
|
|
06:15 — 19:19
|
05:26 — 08:54
NK2677
Spirit Airlines
Houston — Miami
7h 6m stop
16:37 — 19:07
NK2221
Spirit Airlines
Miami — San Juan
|
12h 4m including layover |
Find flight
from$143 |
|
|
07:05 — 14:45
|
07:05 — 10:11
NK1466
Spirit Airlines
Houston — Atlanta
1h 6m stop
11:17 — 14:45
NK1389
Spirit Airlines
Atlanta — San Juan
|
6h 40m including layover |
Find flight
from$130 |
|
|
09:23 — 20:04
|
09:23 — 12:08
NK1145
Spirit Airlines
Houston — Chicago
2h 9m stop
14:17 — 20:04
NK491
Spirit Airlines
Chicago — San Juan
|
9h 41m including layover |
Find flight
from$144 |
|
|
10:08 — 21:04
|
06:00 — 09:34
NK2275
Spirit Airlines
Houston — Miami
4h 45m stop
16:21 — 18:50
NK2057
Spirit Airlines
Miami — San Juan
|
9h 56m including layover |
Find flight
from$143 |
|
|
11:59 — 22:58
|
11:59 — 16:37
NK1206
Spirit Airlines
Houston — Newark
2h 22m stop
18:59 — 22:58
NK1226
Spirit Airlines
Newark — San Juan
|
9h 59m including layover |
Find flight
from$144 |
|
|
13:15 — 01:04
+1 day
|
13:15 — 17:35
NK3157
Spirit Airlines
Houston — Philadelphia
3h 30m stop
21:05 — 01:04
NK2165
Spirit Airlines
Philadelphia — San Juan
|
10h 49m including layover |
Find flight
from$114 |
|
|
13:30 — 00:54
+1 day
|
13:11 — 16:39
NK2166
Spirit Airlines
Houston — Orlando
5h 11m stop
22:09 — 00:54
NK1989
Spirit Airlines
Orlando — San Juan
|
10h 24m including layover |
Find flight
from$143 |
|
|
14:18 — 01:11
+1 day
|
14:18 — 17:52
NK1375
Spirit Airlines
Houston — Orlando
4h 25m stop
22:17 — 01:11
NK3166
Spirit Airlines
Orlando — San Juan
|
9h 53m including layover |
Find flight
from$151 |
|
|
14:23 — 00:21
+1 day
|
08:03 — 11:29
F91418
Frontier Airlines
Houston — Orlando
3h 29m stop
05:15 — 09:10
F91746
Frontier Airlines
Orlando — San Juan
|
8h 58m including layover |
Find flight
from$149 |
|
|
15:11 — 01:35
+1 day
|
15:11 — 18:43
NK1702
Spirit Airlines
Houston — Orlando
4h stop
22:43 — 01:35
NK1514
Spirit Airlines
Orlando — San Juan
|
9h 24m including layover |
Find flight
from$114 |
|
|
16:43 — 23:54
+1 day
|
16:46 — 20:13
F91418
Frontier Airlines
Houston — Orlando
53m stop
17:00 — 19:58
F93506
Frontier Airlines
Orlando — San Juan
|
6h 11m including layover |
Find flight
from$120 |
|
|
17:03 — 17:00
+1 day
|
16:42 — 20:33
F94610
Frontier Airlines
Houston — Raleigh
16h 31m stop
13:42 — 17:04
F91226
Frontier Airlines
Raleigh — San Juan
|
22h 57m including layover |
Find flight
from$155 |
|
|
18:25 — 10:06
+1 day
|
18:25 — 21:58
NK1631
Spirit Airlines
Houston — Miami
9h 42m stop
07:40 — 10:06
NK1396
Spirit Airlines
Miami — San Juan
|
14h 41m including layover |
Find flight
from$114 |
|
|
18:58 — 12:02
+1 day
|
18:58 — 22:50
NK524
Spirit Airlines
Houston — Detroit
8h 40m stop
07:30 — 12:02
NK1543
Spirit Airlines
Detroit — San Juan
|
16h 4m including layover |
Find flight
from$113 |
|
|
19:20 — 11:57
+1 day
|
13:51 — 16:57
NK2571
Spirit Airlines
Houston — Atlanta
9h 56m stop
08:00 — 11:31
NK2404
Spirit Airlines
Atlanta — San Juan
|
15h 37m including layover |
Find flight
from$162 |
|
|
19:36 — 09:43
+1 day
|
19:26 — 23:51
NK2231
Spirit Airlines
Houston — Philadelphia
6h 2m stop
06:00 — 09:43
NK2303
Spirit Airlines
Philadelphia — San Juan
|
13h 7m including layover |
Find flight
from$113 |
|
|
20:51 — 11:01
+1 day
|
11:26 — 15:00
F94978
Frontier Airlines
Houston — Orlando
7h 26m stop
06:00 — 09:53
F91824
Frontier Airlines
Orlando — San Juan
|
13h 10m including layover |
Find flight
from$98 |
|
|
20:56 — 08:59
+1 day
|
20:42 — 00:21
F94978
Frontier Airlines
Houston — Orlando
5h 18m stop
06:00 — 08:58
F92250
Frontier Airlines
Orlando — San Juan
|
11h 3m including layover |
Find flight
from$109 |
|
|
21:13 — 12:20
+1 day
|
21:13 — 00:43
NK1173
Spirit Airlines
Houston — Orlando
8h 51m stop
09:34 — 12:20
NK1989
Spirit Airlines
Orlando — San Juan
|
14h 7m including layover |
Find flight
from$114 |
|
|
21:33 — 15:39
+1 day
|
20:57 — 00:08
F92560
Frontier Airlines
Houston — Tampa
11h 56m stop
14:45 — 17:45
F92216
Frontier Airlines
Tampa — San Juan
|
17h 6m including layover |
Find flight
from$160 |
|
|
07:05 — 00:54
+1 day
|
07:05 — 10:09
NK2170
Spirit Airlines
Houston — Atlanta
5h 10m stop
15:19 — 16:50
NK2460
Spirit Airlines
Atlanta — Orlando
5h 19m stop
22:09 — 00:54
NK1989
Spirit Airlines
Orlando — San Juan
|
16h 49m including layover |
Find flight
from$167 |
|
|
10:03 — 10:06
+1 day
|
10:03 — 13:06
NK1748
Spirit Airlines
Houston — Tampa
16h 34m stop
05:40 — 06:45
NK1756
Spirit Airlines
Tampa — Miami
55m stop
07:40 — 10:06
NK1396
Spirit Airlines
Miami — San Juan
|
23h 3m including layover |
Find flight
from$175 |
|
|
17:53 — 22:38
+1 day
|
17:53 — 21:01
NK2024
Spirit Airlines
Houston — Tampa
55m stop
21:56 — 00:17
NK2448
Spirit Airlines
Tampa — Baltimore
18h 34m stop
18:51 — 22:38
NK2533
Spirit Airlines
Baltimore — San Juan
|
27h 45m including layover |
Find flight
from$180 |
|
*Departure and arrival times - local. Updated on August 29, 2025
Flight Information
Below we will explain in detail what the flights cost on the destination from Houston to San Juan depends on and how to choose the most interesting flight option for you.
Distance between Houston and San Juan is 3211 miles. Time difference between the cities is 2h. Airplanes depart 05:00 to 23:57 from 15 Houston airports and arrive 05:00 to 23:57 to 2 San Juan airports. Average flight time is 4h 34m.
- The fastest flight 4h 22m
- Average flight time 4h 34m
- The earliest flight 05:00
- The latest flight 23:57
- Distance 1996 ml
The cheapest months to travel to San Juan are january (from 98 $), september (from 98 $), august (from 98 $).
The most expensive months are february (from 186 $), june (from 143 $), october (from 119 $).
What is the lowest airfare Houston to San Juan?
The cheapest plane ticket found by our users is $98. This airfare is for economy class on one-way F94978 flight by Frontier Airlines for September 3, 2025 which leaves George Bush in Houston at 20:51 am and arrives at San Juan Luis Munoz Marin Intl at 11:01.
Economy class
$98
Business class
?
First class
?
Popular Airlines on the Route
The flight Houston — San Juan is served by 7 regular airlines and 4 low-cost airlines. Most of the flights on this route are operated by Frontier Airlines - 18 departures per week at the price of from $ 98 . And the most expensive tickets are offered by United Airlines airline - from $ 926.
Direct flights
There are 6 nonstop flights on the route. The fastest direct flight is NK2529 by Spirit Airlines takes 4h 22m and the cheapest is F94978 by Frontier Airlines for $117.
- UA - United Airlinesfrom $119Find
- NK - Spirit Airlinesfrom $117Find
See more direct flights
Connecting Flights
There are 338 flights with layovers on the route. The fastest connecting flight is F91418 by Frontier Airlines takes 6h 11m and the cheapest is F94978 by Frontier Airlines for $98.
- F9 - Frontier Airlinesfrom $98Find
- N3 - Omskaviafrom $340Find
- AV - Aviancafrom $375Find
- Y4 - Volarisfrom $460Find
- UA - United Airlinesfrom $192Find
- NK - Spirit Airlinesfrom $113Find
- G4 - Allegiant Airfrom $205Find
See more connecting flights
Airports
You can fly from Houston to San Juan from 15 airports (Ellington Field, West Houston, Hobby, Park Ten Heliport, Andrau Airpark, George Bush, Greenway Plaza H/P, David Wayne Hooks, Transco Twr Galleria, Westchase Hilton H/P, Spaceland, Woodlawns, Marriot Astrodome Heliport, Central Bus. District, Houston Municipal).
Houston airports
- Ellington Field-EFDFind
- West Houston-IWSFind
- Hobby-HOUfrom $205Find
- Park Ten Heliport-JPTFind
- Andrau Airpark-AAPFind
- George Bush-IAHfrom $98Find
- Greenway Plaza H/P-JGPFind
- David Wayne Hooks-DWHFind
- Transco Twr Galleria-JGQFind
- Westchase Hilton H/P-JWHFind
- Spaceland-SPXFind
- Woodlawns-JWLFind
- Marriot Astrodome Heliport-JMAFind
- Central Bus. District-JDXFind
- Houston Municipal-SGRFind
San Juan airports
- Isla Grande-SIGFind
- Luis Munoz Marin Intl-SJUFind
Airplanes
There are flights to San Juan from Houston by 7 airlines that use 0 aircraft brands. They range from huge modern airplanes to small-sized.
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Top International Destinations from Houston
Our state-of-the art metasearch will definitely provide you with the best airfare on international flights. We’re proud to partner with many reliable travel suppliers located outside the US what gives us an opportunity to offer the most competitive prices on far destinations.
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How to book a plane ticket yourself?
- Fill in the search parameters — cities of departure and destination, departure and return dates and click «Find flights»
- Select the best flight that you like. Please, check the airports of departure and arrival. Select the best fare, but pay attention to the following flight details - airports of departure and arrival, flight duration and layovers. Please use filters and sort to find the best flight.
- Click «Buy» when you are ready — our system will redirect you to the site that sells the selected flight ticket.
- Fill in all passenger and payment information — passport and contact information, please double check all passengers’ names and make a payment for your itinerary.
- That's it — you will receive an email with your e-ticket usually within 10 minutes after your flight is confirmed. Please, print the e-ticket and have it with you at the airport. You would need to have only a passport and/or a required form of ID to travel. Please, check your Visa requirements if you travel outside of the United States or Canada.
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