Cheap Flights from Jacksonville, FL to San Juan from $112

Return flight: San Juan – Jacksonville
Page navigation
Price Calendar Cheap Flights Flights Schedule

On Cheapflightsplus.com you will find 1 direct and 175 connecting flights from Jacksonville to San Juan. You can compare airfare deals from 6 airlines and multiple travel sites from $112, book and save on cheap plane tickets and last minute offers. Also check out JAX-SJU flight schedule to find best flight time, convenient departure and arrival airports.

Find One-Way and Round-Trip Jacksonville to San Juan Flight Deals

To find the cheapest one way airline ticket select the date with the lowest price on the calendar below and click «Find Flights». To search for round-trip flight deals click on the link «Check prices for return flights» and select the date of the return flight. Cheapest flights in November: $112 (one-way), $192 (round-trip).
Direct flights
  • Check to choose departure date Check to choose departure date
Check prices for return flight
Find flights

Best Flights from Jacksonville to San Juan Today

Take a look at the list of non stop flights and flights with layovers from Jacksonville to San Juan with the lowest price of $112. The fastest direct flight takes 3h 6m and the fastest connecting – 7h 24m.
Price Departure Arrival Flight Duration Airline Flight
from $112
Find flight
11:21
Jacksonville
Jacksonville
 14:27
San Juan
Luis Munoz Marin Intl
 3h 6m Frontier Airlines
F93306
from $124
Find flight
16:33
Jacksonville
Jacksonville
 23:59+1 день
San Juan
Luis Munoz Marin Intl
 7h 26m
layover
1h 13m - Philadelphia
 Frontier Airlines
F94022
F94462
from $160
Find flight
16:12
Jacksonville
Jacksonville
 10:29+1 день
San Juan
Luis Munoz Marin Intl
 18h 17m
layover
12h 45m - Baltimore
 Allegiant Air
G4376
NK1622
from $163
Find flight
11:47
Jacksonville
Jacksonville
 10:06+1 день
San Juan
Luis Munoz Marin Intl
 22h 19m
layover
6h 8m - Akron
9h 6m - Miami
 Allegiant Air
G43491
G4530
NK1396
from $201
Find flight
21:42
Jacksonville
Jacksonville
 22:58+1 день
San Juan
Luis Munoz Marin Intl
 25h 16m
layover
6h 56m - Pittsburgh
11h 4m - Newark
 Allegiant Air
G42749
NK1781
NK1226
Show all tickets
*Departure and arrival times - local. Prices indicated for one-way flights. Information updated on September 18, 2025
Full flight schedule will help you in detecting at what time planes fly from Jacksonville to San Juan. You can also specify the concrete flights and airlines on the route and how long the flight actually is. Use the calendar for today, tomorrow or other specific date as some flights are available only on certain days of the week.
Departure Arrival Flight Details Flight Duration Price
11:21 — 14:27
11:21 — 14:27 F93306 Frontier Airlines
Jacksonville — San Juan
3h 6m
Find flight
from$112
11:47 — 10:06
+1 day
11:47 — 13:46 G43491 Allegiant Air
Jacksonville — Akron
6h 8m stop
19:54 — 22:34 G4530 Allegiant Air
Akron — Miami
9h 6m stop
07:40 — 10:06 NK1396 Spirit Airlines
Miami — San Juan
22h 19m
including layover
Find flight
from$163
12:45 — 23:59
+1 day
12:45 — 15:03 F92816 Frontier Airlines
Jacksonville — Philadelphia
5h 2m stop
20:05 — 23:59 F94462 Frontier Airlines
Philadelphia — San Juan
11h 14m
including layover
Find flight
from$142
12:57 — 22:58
+1 day
12:57 — 14:49 G43451 Allegiant Air
Jacksonville — Des Moines
17h 46m stop
08:35 — 12:05 G4431 Allegiant Air
Des Moines — Newark
6h 54m stop
18:59 — 22:58 NK1226 Spirit Airlines
Newark — San Juan
34h 1m
including layover
Find flight
from$186
13:56 — 22:58
+1 day
13:56 — 16:11 G41551 Allegiant Air
Jacksonville — Flint
17h 4m stop
09:15 — 11:05 G41533 Allegiant Air
Flint — Newark
7h 54m stop
18:59 — 22:58 NK1226 Spirit Airlines
Newark — San Juan
33h 2m
including layover
Find flight
from$186
13:56 — 22:58
+1 day
13:56 — 16:11 G43153 Allegiant Air
Jacksonville — Flint
17h 4m stop
09:15 — 11:05 G41526 Allegiant Air
Flint — Newark
7h 54m stop
18:59 — 22:58 NK1226 Spirit Airlines
Newark — San Juan
33h 2m
including layover
Find flight
from$231
16:12 — 10:29
+1 day
16:12 — 18:03 G4376 Allegiant Air
Jacksonville — Baltimore
12h 45m stop
06:48 — 10:29 NK1622 Spirit Airlines
Baltimore — San Juan
18h 17m
including layover
Find flight
from$160
16:12 — 21:50
+1 day
16:12 — 18:03 G4376 Allegiant Air
Jacksonville — Baltimore
17h 30m stop
11:33 — 14:06 NK2175 Spirit Airlines
Baltimore — Houston
2h 18m stop
16:24 — 21:50 NK1626 Spirit Airlines
Houston — San Juan
29h 38m
including layover
Find flight
from$179
16:12 — 12:20
+1 day
16:12 — 18:03 G4376 Allegiant Air
Jacksonville — Baltimore
11h 57m stop
06:00 — 08:29 NK1960 Spirit Airlines
Baltimore — Orlando
1h 5m stop
09:34 — 12:20 NK1989 Spirit Airlines
Orlando — San Juan
20h 8m
including layover
Find flight
from$226
16:12 — 12:20
+1 day
16:12 — 18:03 G4414 Allegiant Air
Jacksonville — Baltimore
11h 57m stop
06:00 — 08:29 NK1960 Spirit Airlines
Baltimore — Orlando
1h 5m stop
09:34 — 12:20 NK1989 Spirit Airlines
Orlando — San Juan
20h 8m
including layover
Find flight
from$228
16:12 — 20:06
+1 day
16:12 — 18:03 G4414 Allegiant Air
Jacksonville — Baltimore
11h 57m stop
06:00 — 08:29 NK1960 Spirit Airlines
Baltimore — Orlando
8h 46m stop
17:15 — 20:06 NK1824 Spirit Airlines
Orlando — San Juan
27h 54m
including layover
Find flight
from$228
16:33 — 23:59
+1 day
16:33 — 18:52 F94022 Frontier Airlines
Jacksonville — Philadelphia
1h 13m stop
20:05 — 23:59 F94462 Frontier Airlines
Philadelphia — San Juan
7h 26m
including layover
Find flight
from$124
18:40 — 16:46
+1 day
18:40 — 21:06 MX2503 Mexicana
Jacksonville — Hartford
12h 9m stop
09:15 — 11:25 NK3909 Spirit Airlines
Hartford — Detroit
51m stop
12:16 — 16:46 NK3898 Spirit Airlines
Detroit — San Juan
22h 6m
including layover
Find flight
from$224
20:24 — 16:46
+1 day
20:24 — 22:50 MX503 Mexicana
Jacksonville — Hartford
10h 25m stop
09:15 — 11:25 NK3909 Spirit Airlines
Hartford — Detroit
51m stop
12:16 — 16:46 NK3898 Spirit Airlines
Detroit — San Juan
20h 22m
including layover
Find flight
from$224
21:42 — 22:58
+1 day
21:42 — 23:34 G42749 Allegiant Air
Jacksonville — Pittsburgh
6h 56m stop
06:30 — 07:55 NK1781 Spirit Airlines
Pittsburgh — Newark
11h 4m stop
18:59 — 22:58 NK1226 Spirit Airlines
Newark — San Juan
25h 16m
including layover
Find flight
from$201
*Departure and arrival times - local. Updated on September 18, 2025

Flight Information

Below we will explain in detail what the flights cost on the destination from Jacksonville to San Juan depends on and how to choose the most interesting flight option for you.

Distance between Jacksonville and San Juan is 2073 miles. Time difference between the cities is 1h. Airplanes depart 07:00 to 21:55 from 4 Jacksonville airports and arrive 07:00 to 21:55 to 2 San Juan airports. Average flight time is 3h 6m.

  • The fastest flight 3h 6m
  • Average flight time 3h 6m
  • The earliest flight 07:00
  • The latest flight 21:55
  • Distance 1289 ml

The cheapest months to travel to San Juan are august (from 112 $), july (from 116 $), november (from 372 $).

The most expensive months are december (from 444 $), september (from 411 $), november (from 372 $).

What is the lowest airfare Jacksonville to San Juan?

The cheapest plane ticket found by our users is $112. This airfare is for economy class on one-way F93306 flight by Frontier Airlines for July 4, 2025 which leaves Jacksonville in Jacksonville at 11:21 am and arrives at San Juan Luis Munoz Marin Intl at 14:27.

Economy class
$112
Find
Business class
?
Find
First class
?
Find

Popular Airlines on the Route

The flight Jacksonville — San Juan is served by 6 regular airlines and 3 low-cost airlines. Most of the flights on this route are operated by Air Canada - 3 departures per week at the price of from $ 705 . And the most expensive tickets are offered by Air Canada airline - from $ 2424.

Direct flights

There are 1 nonstop flights on the route. The fastest direct flight is F93306 by Frontier Airlines takes 3h 6m and the cheapest is F93306 by Frontier Airlines for $112.

  • F9 - Frontier Airlines
    from $112
    Find
See more direct flights

Connecting Flights

There are 175 flights with layovers on the route. The fastest connecting flight is UA6198 by United Airlines takes 7h 24m and the cheapest is F93306 by Frontier Airlines for $124.

  • AC - Air Canada
    from $705
    Find
  • F9 - Frontier Airlines
    from $124
    Find
  • SY - Sun Country Airlines
    from $270
    Find
  • MX - Mexicana
    from $224
    Find
  • UA - United Airlines
    from $276
    Find
  • G4 - Allegiant Air
    from $160
    Find
See more connecting flights

Airports

You can fly from Jacksonville to San Juan from 4 airports (Jacksonville, Craig Municipal, Jacksonville NAS, Cecil Field).

Jacksonville airports

  • Jacksonville-JAX
    from $112
    Find
  • Craig Municipal-CRG
    Find
  • Jacksonville NAS-NIP
    Find
  • Cecil Field-VQQ
    Find

San Juan airports

  • Isla Grande-SIG
    Find
  • Luis Munoz Marin Intl-SJU
    Find

Airplanes

There are flights to San Juan from Jacksonville by 6 airlines that use 0 aircraft brands. They range from huge modern airplanes to small-sized.

Top Domestic Destinations from Jacksonville

You may also consider searching for discounted plane tickets to some other popular places from Jacksonville within United States.

Top International Destinations from Jacksonville

Our state-of-the art metasearch will definitely provide you with the best airfare on international flights. We’re proud to partner with many reliable travel suppliers located outside the US what gives us an opportunity to offer the most competitive prices on far destinations.

How to book a plane ticket yourself?

How to book an air ticket yourself?
  • Fill in the search parameters — cities of departure and destination, departure and return dates and click «Find flights»
  • Select the best flight that you like. Please, check the airports of departure and arrival. Select the best fare, but pay attention to the following flight details - airports of departure and arrival, flight duration and layovers. Please use filters and sort to find the best flight.
  • Click «Buy» when you are ready — our system will redirect you to the site that sells the selected flight ticket.
  • Fill in all passenger and payment information — passport and contact information, please double check all passengers’ names and make a payment for your itinerary.
  • That's it — you will receive an email with your e-ticket usually within 10 minutes after your flight is confirmed. Please, print the e-ticket and have it with you at the airport. You would need to have only a passport and/or a required form of ID to travel. Please, check your Visa requirements if you travel outside of the United States or Canada.

    To find a plane ticket, please select dates.

Back