Cheap Flights from Jacksonville, FL to San Juan from $88
Return flight: San Juan – Jacksonville
On Cheapflightsplus.com you will find 1 direct and 175 connecting flights from Jacksonville to San Juan. You can compare airfare deals from 6 airlines and multiple travel sites from $88, book and save on cheap plane tickets and last minute offers. Also check out JAX-SJU flight schedule to find best flight time, convenient departure and arrival airports.
Find One-Way and Round-Trip Jacksonville to San Juan Flight Deals
To find the cheapest one way airline ticket select the date with the lowest price on the calendar below and click «Find Flights».
To search for round-trip flight deals click on the link «Check prices for return flights» and select the date of the return flight.
Cheapest flights in November: $88 (one-way), $151 (round-trip).
Direct flights
Check prices for return flight
Best Flights from Jacksonville to San Juan Today
Take a look at the list of non stop flights and flights with layovers from Jacksonville to San Juan with the lowest price of $88. The fastest direct flight takes 3h 6m and the fastest connecting – 7h 24m.
| Price | Departure | Arrival | Flight Duration | Airline | Flight |
|---|---|---|---|---|---|
| from $88 | 11:21 Jacksonville Jacksonville | 14:27 San Juan Luis Munoz Marin Intl | 3h 6m | Frontier Airlines | F93306 |
| from $98 | 16:33 Jacksonville Jacksonville | 23:59+1 день San Juan Luis Munoz Marin Intl | 7h 26m layover 1h 13m - Philadelphia | Frontier Airlines | F94022 F94462 |
| from $112 | 12:45 Jacksonville Jacksonville | 23:59+1 день San Juan Luis Munoz Marin Intl | 11h 14m layover 5h 2m - Philadelphia | Frontier Airlines | F92816 F94462 |
| from $126 | 16:12 Jacksonville Jacksonville | 10:29+1 день San Juan Luis Munoz Marin Intl | 18h 17m layover 12h 45m - Baltimore | Allegiant Air | G4376 NK1622 |
| from $198 | 16:12 Jacksonville Jacksonville | 10:29+1 день San Juan Luis Munoz Marin Intl | 18h 17m layover 12h 45m - Baltimore | Allegiant Air | G4414 NK1622 |
| from $206 | 21:55 Jacksonville Jacksonville | 09:54+1 день San Juan Luis Munoz Marin Intl | 11h 59m layover 5h 48m - Philadelphia | Frontier Airlines | F93480 F91016 |
| from $129 | 11:47 Jacksonville Jacksonville | 10:06+1 день San Juan Luis Munoz Marin Intl | 22h 19m layover 6h 8m - Akron 9h 6m - Miami | Allegiant Air | G43491 G4530 NK1396 |
| from $147 | 13:56 Jacksonville Jacksonville | 22:58+1 день San Juan Luis Munoz Marin Intl | 33h 2m layover 17h 4m - Flint 7h 54m - Newark | Allegiant Air | G41551 G41533 NK1226 |
| from $147 | 12:57 Jacksonville Jacksonville | 22:58+1 день San Juan Luis Munoz Marin Intl | 34h 1m layover 17h 46m - Des Moines 6h 54m - Newark | Allegiant Air | G43451 G4431 NK1226 |
| from $159 | 21:42 Jacksonville Jacksonville | 22:58+1 день San Juan Luis Munoz Marin Intl | 25h 16m layover 6h 56m - Pittsburgh 11h 4m - Newark | Allegiant Air | G42749 NK1781 NK1226 |
| from $177 | 20:24 Jacksonville Jacksonville | 16:46+1 день San Juan Luis Munoz Marin Intl | 20h 22m layover 10h 25m - Hartford 0h 51m - Detroit | Mexicana | MX503 NK3909 NK3898 |
| from $177 | 18:40 Jacksonville Jacksonville | 16:46+1 день San Juan Luis Munoz Marin Intl | 22h 6m layover 12h 9m - Hartford 0h 51m - Detroit | Mexicana | MX2503 NK3909 NK3898 |
| from $183 | 13:56 Jacksonville Jacksonville | 22:58+1 день San Juan Luis Munoz Marin Intl | 33h 2m layover 17h 4m - Flint 7h 54m - Newark | Allegiant Air | G43153 G41526 NK1226 |
| from $186 | 15:28 Jacksonville Jacksonville | 12:20+1 день San Juan Luis Munoz Marin Intl | 20h 52m layover 12h 51m - Norfolk 1h 34m - Orlando | Allegiant Air | G4629 NK1262 NK1989 |
| from $192 | 09:44 Jacksonville Jacksonville | 19:19+1 день San Juan Luis Munoz Marin Intl | 33h 35m layover 19h 41m - Nashville 7h 28m - Miami | Allegiant Air | G41942 NK2407 NK2221 |
| from $194 | 12:57 Jacksonville Jacksonville | 19:19+1 день San Juan Luis Munoz Marin Intl | 30h 22m layover 15h 41m - Des Moines 6h 5m - Miami | Allegiant Air | G43451 G4466 NK2221 |
Show all tickets
*Departure and arrival times - local. Prices indicated for one-way flights. Information updated on June 28, 2025
Flight Schedule Jacksonville (Florida) to San Juan
Full flight schedule will help you in detecting at what time planes fly from Jacksonville to San Juan. You can also specify the concrete flights and airlines on the route and how long the flight actually is. Use the calendar for today, tomorrow or other specific date as some flights are available only on certain days of the week.
| Departure | Arrival | Flight Details | Flight Duration | Price |
|---|---|---|---|---|
|
11:21 — 14:27
|
11:21 — 14:27
F93306
Frontier Airlines
Jacksonville — San Juan
|
3h 6m |
Find flight
from$88 |
|
|
07:00 — 23:57
+1 day
|
07:00 — 09:19
UA2732
United Airlines
Jacksonville — Newark
10h 35m stop
19:53 — 23:57
UA1543
United Airlines
Newark — San Juan
|
16h 57m including layover |
Find flight
from$241 |
|
|
07:25 — 15:42
|
07:00 — 08:33
UA2453
United Airlines
Jacksonville — Houston
1h 16m stop
10:14 — 16:36
UA1192
United Airlines
Houston — San Juan
|
8h 17m including layover |
Find flight
from$246 |
|
|
10:27 — 23:57
+1 day
|
10:27 — 12:46
UA2734
United Airlines
Jacksonville — Newark
7h 7m stop
19:53 — 23:57
UA1543
United Airlines
Newark — San Juan
|
13h 30m including layover |
Find flight
from$241 |
|
|
12:45 — 23:59
+1 day
|
12:45 — 15:03
F92816
Frontier Airlines
Jacksonville — Philadelphia
5h 2m stop
20:05 — 23:59
F94462
Frontier Airlines
Philadelphia — San Juan
|
11h 14m including layover |
Find flight
from$112 |
|
|
16:12 — 10:29
+1 day
|
16:12 — 18:03
G4376
Allegiant Air
Jacksonville — Baltimore
12h 45m stop
06:48 — 10:29
NK1622
Spirit Airlines
Baltimore — San Juan
|
18h 17m including layover |
Find flight
from$126 |
|
|
16:33 — 23:59
+1 day
|
16:33 — 18:52
F94022
Frontier Airlines
Jacksonville — Philadelphia
1h 13m stop
20:05 — 23:59
F94462
Frontier Airlines
Philadelphia — San Juan
|
7h 26m including layover |
Find flight
from$98 |
|
|
21:55 — 09:54
+1 day
|
21:55 — 00:12
F93480
Frontier Airlines
Jacksonville — Philadelphia
5h 48m stop
06:00 — 09:54
F91016
Frontier Airlines
Philadelphia — San Juan
|
11h 59m including layover |
Find flight
from$206 |
|
|
08:00 — 21:24
|
08:00 — 09:45
UA411
United Airlines
Jacksonville — Chicago
1h 5m stop
10:50 — 13:49
UA758
United Airlines
Chicago — Washington D.C.
3h 39m stop
17:28 — 21:24
UA2025
United Airlines
Washington D.C. — San Juan
|
13h 24m including layover |
Find flight
from$268 |
|
|
09:44 — 19:19
+1 day
|
09:44 — 10:19
G41942
Allegiant Air
Jacksonville — Nashville
19h 41m stop
06:00 — 09:17
NK2407
Spirit Airlines
Nashville — Miami
7h 28m stop
16:45 — 19:19
NK2221
Spirit Airlines
Miami — San Juan
|
33h 35m including layover |
Find flight
from$192 |
|
|
09:44 — 12:20
+1 day
|
09:44 — 10:19
G41942
Allegiant Air
Jacksonville — Nashville
10h 37m stop
20:56 — 23:53
NK1747
Spirit Airlines
Nashville — Orlando
9h 41m stop
09:34 — 12:20
NK1989
Spirit Airlines
Orlando — San Juan
|
26h 36m including layover |
Find flight
from$207 |
|
|
10:33 — 11:57
+1 day
|
10:33 — 12:27
MX400
Mexicana
Jacksonville — Columbus
17h 33m stop
06:00 — 07:23
NK2706
Spirit Airlines
Columbus — Atlanta
1h 6m stop
08:29 — 11:57
NK2404
Spirit Airlines
Atlanta — San Juan
|
25h 24m including layover |
Find flight
from$249 |
|
|
11:47 — 10:06
+1 day
|
11:47 — 13:46
G43491
Allegiant Air
Jacksonville — Akron
6h 8m stop
19:54 — 22:34
G4530
Allegiant Air
Akron — Miami
9h 6m stop
07:40 — 10:06
NK1396
Spirit Airlines
Miami — San Juan
|
22h 19m including layover |
Find flight
from$129 |
|
|
12:57 — 22:58
+1 day
|
12:57 — 14:49
G43451
Allegiant Air
Jacksonville — Des Moines
17h 46m stop
08:35 — 12:05
G4431
Allegiant Air
Des Moines — Newark
6h 54m stop
18:59 — 22:58
NK1226
Spirit Airlines
Newark — San Juan
|
34h 1m including layover |
Find flight
from$147 |
|
|
13:56 — 22:58
+1 day
|
13:56 — 16:11
G41551
Allegiant Air
Jacksonville — Flint
17h 4m stop
09:15 — 11:05
G41533
Allegiant Air
Flint — Newark
7h 54m stop
18:59 — 22:58
NK1226
Spirit Airlines
Newark — San Juan
|
33h 2m including layover |
Find flight
from$147 |
|
|
13:56 — 22:58
+1 day
|
13:56 — 16:11
G43153
Allegiant Air
Jacksonville — Flint
17h 4m stop
09:15 — 11:05
G41526
Allegiant Air
Flint — Newark
7h 54m stop
18:59 — 22:58
NK1226
Spirit Airlines
Newark — San Juan
|
33h 2m including layover |
Find flight
from$183 |
|
|
14:08 — 12:02
+1 day
|
14:08 — 15:46
MX475
Mexicana
Jacksonville — Norfolk
2h 44m stop
18:30 — 20:19
NK1738
Spirit Airlines
Norfolk — Detroit
11h 11m stop
07:30 — 12:02
NK1543
Spirit Airlines
Detroit — San Juan
|
21h 54m including layover |
Find flight
from$258 |
|
|
14:08 — 10:06
+1 day
|
14:08 — 15:46
MX475
Mexicana
Jacksonville — Norfolk
1h 34m stop
17:20 — 19:50
NK1168
Spirit Airlines
Norfolk — Miami
11h 50m stop
07:40 — 10:06
NK1396
Spirit Airlines
Miami — San Juan
|
19h 58m including layover |
Find flight
from$259 |
|
|
15:28 — 12:20
+1 day
|
15:28 — 17:04
G4629
Allegiant Air
Jacksonville — Norfolk
12h 51m stop
05:55 — 08:00
NK1262
Spirit Airlines
Norfolk — Orlando
1h 34m stop
09:34 — 12:20
NK1989
Spirit Airlines
Orlando — San Juan
|
20h 52m including layover |
Find flight
from$186 |
|
|
15:43 — 09:56
+1 day
|
15:43 — 17:21
MX401
Mexicana
Jacksonville — Norfolk
2h 23m stop
19:44 — 21:50
NK1575
Spirit Airlines
Norfolk — Orlando
9h 10m stop
07:00 — 09:56
NK3159
Spirit Airlines
Orlando — San Juan
|
18h 13m including layover |
Find flight
from$222 |
|
|
17:34 — 12:47
+1 day
|
17:34 — 18:58
MX595
Mexicana
Jacksonville — Raleigh
1h 56m stop
20:54 — 22:54
NK2053
Spirit Airlines
Raleigh — Dallas
8h 6m stop
07:00 — 12:47
NK3707
Spirit Airlines
Dallas — San Juan
|
19h 13m including layover |
Find flight
from$209 |
|
|
18:40 — 16:46
+1 day
|
18:40 — 21:06
MX2503
Mexicana
Jacksonville — Hartford
12h 9m stop
09:15 — 11:25
NK3909
Spirit Airlines
Hartford — Detroit
51m stop
12:16 — 16:46
NK3898
Spirit Airlines
Detroit — San Juan
|
22h 6m including layover |
Find flight
from$177 |
|
|
18:55 — 11:57
+1 day
|
18:55 — 20:58
UA6209
United Airlines
Jacksonville — Washington D.C.
1h 32m stop
22:30 — 23:50
UA1997
United Airlines
Washington D.C. — Newark
8h 5m stop
07:55 — 11:57
UA2143
United Airlines
Newark — San Juan
|
17h 2m including layover |
Find flight
from$241 |
|
|
19:59 — 19:19
+1 day
|
19:59 — 21:52
G4428
Allegiant Air
Jacksonville — Covington
8h 23m stop
06:15 — 08:44
G4427
Allegiant Air
Covington — Miami
8h 1m stop
16:45 — 19:19
NK2221
Spirit Airlines
Miami — San Juan
|
23h 20m including layover |
Find flight
from$233 |
|
|
20:24 — 16:46
+1 day
|
20:24 — 22:50
MX503
Mexicana
Jacksonville — Hartford
10h 25m stop
09:15 — 11:25
NK3909
Spirit Airlines
Hartford — Detroit
51m stop
12:16 — 16:46
NK3898
Spirit Airlines
Detroit — San Juan
|
20h 22m including layover |
Find flight
from$177 |
|
|
20:26 — 19:19
+1 day
|
20:26 — 22:23
G4611
Allegiant Air
Jacksonville — Indianapolis
8h 4m stop
06:27 — 09:00
NK2121
Spirit Airlines
Indianapolis — Miami
7h 45m stop
16:45 — 19:19
NK2221
Spirit Airlines
Miami — San Juan
|
22h 53m including layover |
Find flight
from$228 |
|
|
21:42 — 22:58
+1 day
|
21:42 — 23:34
G42749
Allegiant Air
Jacksonville — Pittsburgh
6h 56m stop
06:30 — 07:55
NK1781
Spirit Airlines
Pittsburgh — Newark
11h 4m stop
18:59 — 22:58
NK1226
Spirit Airlines
Newark — San Juan
|
25h 16m including layover |
Find flight
from$159 |
|
*Departure and arrival times - local. Updated on June 28, 2025
Flight Information
Below we will explain in detail what the flights cost on the destination from Jacksonville to San Juan depends on and how to choose the most interesting flight option for you.
Distance between Jacksonville and San Juan is 2073 miles. Time difference between the cities is 1h. Airplanes depart 07:00 to 21:55 from 4 Jacksonville airports and arrive 07:00 to 21:55 to 2 San Juan airports. Average flight time is 3h 6m.
- The fastest flight 3h 6m
- Average flight time 3h 6m
- The earliest flight 07:00
- The latest flight 21:55
- Distance 1289 ml
The cheapest months to travel to San Juan are august (from 118 $), july (from 123 $), november (from 394 $).
The most expensive months are december (from 470 $), september (from 435 $), november (from 394 $).
What is the lowest airfare Jacksonville to San Juan?
The cheapest plane ticket found by our users is $88. This airfare is for economy class on one-way F93306 flight by Frontier Airlines for August 16, 2025 which leaves Jacksonville in Jacksonville at 11:21 am and arrives at San Juan Luis Munoz Marin Intl at 14:27.
Economy class
$88
Business class
?
First class
?
Popular Airlines on the Route
The flight Jacksonville — San Juan is served by 6 regular airlines and 3 low-cost airlines. Most of the flights on this route are operated by Air Canada - 3 departures per week at the price of from $ 558 . And the most expensive tickets are offered by Air Canada airline - from $ 1923.
Direct flights
There are 1 nonstop flights on the route. The fastest direct flight is F93306 by Frontier Airlines takes 3h 6m and the cheapest is F93306 by Frontier Airlines for $88.
- F9 - Frontier Airlinesfrom $88Find
See more direct flights
Connecting Flights
There are 175 flights with layovers on the route. The fastest connecting flight is UA6198 by United Airlines takes 7h 24m and the cheapest is F93306 by Frontier Airlines for $98.
- AC - Air Canadafrom $558Find
- F9 - Frontier Airlinesfrom $98Find
- SY - Sun Country Airlinesfrom $213Find
- MX - Mexicanafrom $177Find
- UA - United Airlinesfrom $219Find
- G4 - Allegiant Airfrom $126Find
See more connecting flights
Airports
You can fly from Jacksonville to San Juan from 4 airports (Jacksonville, Craig Municipal, Jacksonville NAS, Cecil Field).
Jacksonville airports
- Jacksonville-JAXfrom $88Find
- Craig Municipal-CRGFind
- Jacksonville NAS-NIPFind
- Cecil Field-VQQFind
San Juan airports
- Isla Grande-SIGFind
- Luis Munoz Marin Intl-SJUFind
Airplanes
There are flights to San Juan from Jacksonville by 6 airlines that use 0 aircraft brands. They range from huge modern airplanes to small-sized.
Top Domestic Destinations from Jacksonville
You may also consider searching for discounted plane tickets to some other popular places from Jacksonville within United States.
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Top International Destinations from Jacksonville
Our state-of-the art metasearch will definitely provide you with the best airfare on international flights. We’re proud to partner with many reliable travel suppliers located outside the US what gives us an opportunity to offer the most competitive prices on far destinations.
- from $69Find
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How to book a plane ticket yourself?
- Fill in the search parameters — cities of departure and destination, departure and return dates and click «Find flights»
- Select the best flight that you like. Please, check the airports of departure and arrival. Select the best fare, but pay attention to the following flight details - airports of departure and arrival, flight duration and layovers. Please use filters and sort to find the best flight.
- Click «Buy» when you are ready — our system will redirect you to the site that sells the selected flight ticket.
- Fill in all passenger and payment information — passport and contact information, please double check all passengers’ names and make a payment for your itinerary.
- That's it — you will receive an email with your e-ticket usually within 10 minutes after your flight is confirmed. Please, print the e-ticket and have it with you at the airport. You would need to have only a passport and/or a required form of ID to travel. Please, check your Visa requirements if you travel outside of the United States or Canada.
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